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Moravcová L., Perglová I., Pyšek P., Jarošík V. & Pergl J. 2005: Effects of fruit position on fruit mass and seed germination in the alien species Heracleum mantegazzianum (Apiaceae) and the implications for its invasion. Acta Oecologica 28, 1 - 10.
Müllerová J., Pyšek P., Jarošík V. & Pergl J. 2005: Aerial photographs as a tool for assessing the regional dynamics of the invasive plant species Heracleum mantegazzianum. Journal of Applied Ecology 42, 1042 - 1053.
Nielsen C., Ravn H. P., Cock M., Nentwig W. (eds.), Booy O., Eckstein L., Hansen S. E., Hattendorf J., Hüls J., Jahodová Š., Krinke L., Moravcová L., Müllerová J., Otte A., Pergl J., Perglová I., Priekule I., Pyšek P., Thiele J., Treikale O., Trybush S., Vanaga I. & Wittenberg R. 2005: The giant hogweed best practice manual. Guidelines for the management and control of an invasive alien weed in Europe. Forest and Landscape Denmark, Hoersholm, Denmark, 1 - 44.
Pergl J., Perglová I. & Pyšek P. 2005: Věková struktura populací Heracleum mantegazzianum zjišovaná pomocí herbochronologie. Zprávy Čes. Bot. Společ., Praha, 40, Mater. 20, 121 - 126.
Pyšek P. 2005: Survival rates in the Czech Republic of introduced plants known as wool aliens. Biological Invasions 7, 567 - 576.
Pyšek P. 2005: Zavlečené a invazní druhy jako ukazatele změn biodiverzity. In: Vačkář D. (ed.), Ukazatele změn biodiverzity, p. 129–146, Academia, Praha., 129 - 146.
Pyšek P. & Hulme P. E. 2005: Spatio-temporal dynamics of plant invasions: Linking pattern to process. Ecoscience 12, 302 - 315.
Pyšek P. & Jarošík V. 2005: Residence time determines the distribution of alien plants. In: Inderjit (ed.), Invasive plants: ecological and agricultural aspects, Birkhäuser Verlag-AG, Basel., 77 - 96.
Pyšek P., Jarošík V., Chytrý M., Kropáč Z., Tichý L. & Wild. J. 2005: Alien plants in temperate weed communities: Prehistoric and recent invaders occupy different habitats. Ecology 86, 772 - 785.
Pyšek P., Jarošík V., Kropáč Z., Chytrý M., Wild J. & Tichý L. 2005: Effect of abiotic factors on species richness and cover in Central European weed communities. Agriculture Ecosystems and Environment 109, 1 - 8.
Settele J., Hammen V., Hulme P., Karlson U., Klotz S., Kotarac M., Kunin W., Marion G., O’Connor M., Petanidou T., Peterson K., Potts S., Pritchard H., Pyšek P., Rounsevell M., Spangenberg J., Steffan-Dewenter I., Sykes M., Vighi M., Zobel M. & Kühn I. 2005: ALARM: Assessing LArge-scale environmental Risks for biodiversity with tested Methods: The concept, objectives, structure and management of a large Integrated Project within the 6th framework programme of the European Commission. 14, 69 - 72.
Thuiller W., Richardson D. M., Pyšek P., Midgley G. F., Hughes G. O. & Rouget M. 2005: Niche-based modelling as a tool for predicting the risk of alien plant invasions at a global scale. Global Change Biology 11, 2234 - 2250.
Williamson M., Pyšek P., Jarošík V. & Prach K. 2005: On the rates and patterns of spread of alien plants in the Czech Republic, Britain and Ireland. Ecoscience 12, 424 - 433.
Lososová Z., Chytrý M., Cimalová Š., Kropáč Z., Otýpková Z., Pyšek P. & Tichý L. 2004: Weed vegetation of arable land in Central Europe: gradients in diversity and species composition. 15, 415 - 422.
Mandák B., Pyšek P. & Bímová K. 2004: History of the invasion and distribution of Reynoutria taxa in the Czech Republic: a hybrid spreading faster than its parents. Preslia 76, 15 - 64.
Pyšek P., Chocholoušková Z., Pyšek A., Jarošík V., Chytrý M. & Tichý L. 2004: Trends in species diversity and composition of urban vegetation over three decades. 15, 781 - 788.
Pyšek P. & Kaplan Z. (eds.) 2004: Botanické studie věnované památce Emila Hadače / Botanical studies dedicated to the memory of Emil Hadač. Preslia 76, 193 - 290.
Pyšek P., Richardson D.M., Rejmánek M., Webster G. & Kirschner J. 2004: Alien plants in checklists and floras: towards better communication between taxonomists and ecologists. 53, 131 - 143.
Pyšek P., Richardson D. M. & Williamson M. 2004: Predicting and explaining plant invasions through analysis of source area floras: some critical considerations. 10, 179 - 187.
Pyšek P & Sádlo J. 2004: S vlky výt: alternativy boje proti zavlečeným druhům rostlin. Vesmír 83, 140 - 145.