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Jaggi K. E., Krak K., Štorchová H., Mandák B., Marcheschi A., Belyayev A., Jellen E. n., Sproul J., Jarvis D. & Maughan P. J. 2025: A pangenome reveals LTR repeat dynamics as a major driver of genome evolution in Chenopodium. The Plant Genome 18, 1 - 28. https://doi.org/10.1002/tpg2.70010
Krak K,, Balšánková T., Šemberová K., Hadincová V., Pecháčková S., Skálová H. & Herben T. 2025: Species-specific root-shoot ratios in a diverse grassland community. Functional Ecology 39, 51 - 63. https://doi.org/10.1111/1365-2435.14716
Mahlerová K., Jakubec P., Krak K. & Růžička J. 2025: Resolving the intergeneric phylogeny of the large carrion beetles (Staphylinidae: Silphinae: Silphini). Systematic Entomology 50, 168 - 179. doi:10.1111/syen.12650
Belyayev A., Kalendar R., Josefiová J., Paštová L., Habibi F., Mahelka V., Mandák B. & Krak K. 2023: Telomere sequence variability in genotypes from natural plant populations: unusual block-organized double-monomer terminal telomeric arrays. BMC Genomics 24, 1 - 11. doi:10.1186/s12864-023-09657-y
Habibi F., Mosyakin S. L., Shynder O. I., Krak K., Čortan D., Filippi G. A. & Mandák B. 2023: Chenopodium ucrainicum (Amaranthaceae), a new ‘BB’ genome diploid species: karyological, cytological and molecular evidence. Botanical Journal of the Linnean Society 203, 401 - 410. https://doi.org/10.1093/botlinnean/boad032
Mahelka V., Kopecký D., Majka J. & Krak K. 2023: Uniparental expression of ribosomal RNA in ×Festulolium grasses: a link between the genome and nucleolar dominance. Frontiers in Plant Science 14, 1 - 17. doi:10.3389/fpls.2023.1276252
Skálová H., Jandová K., Balšánková T., Hadincová V., Krahulec F., Pecháčková S., Krak K. & Herben T. 2023: Cations make a difference: Soil nutrient patches and fine-scale root abundance of individual species in a mountain grassland. Functional Ecology 37, 915 - 928. doi:10.1111/1365-2435.14277
Young L. A., Maughan P. J., Jarvis D. E., Hunt S. P., Warner H. C., Durrant K. K., Kohlert T., Curti R. N., Bertero D., Filippi G. A., Pospíšilíková T., Krak K., Mandák B. & Jellen E. N. 2023: A chromosome-scale reference of Chenopodium watsonii helps elucidate relationships within the North American A-genome Chenopodium species and with quinoa. The Plant Genome 16, 1 - 17. https://doi.org/10.1002/tpg2.20349
Belyayev A., Josefiová J., Jandová M., Kalendar R., Mahelka V., Mandák B. & Krak K. 2022: The structural diversity of CACTA transposons in genomes of Chenopodium (Amaranthaceae, Caryophyllales) species: specific traits and comparison with the similar elements of angiosperms. Mobile DNA 13, 1 - 16. doi:10.1186/s13100-022-00265-3
Herben T., Šašek J., Balšánková T., Hadincová V., Krahulec F., Krak K., Pecháčková S. & Skálová H. 2022: The shape of root systems in a mountain meadow: plastic responses or species-specific architectural blueprints? New Phytologist 235, 2223 - 2236. doi:10.1111/nph.18132
Šmíd J., Vít P., Douda J., Krak K. & Mandák B. 2022: Distribution, hybridisation and morphological variation in Alnus rohlenae (Betulaceae) an endemic species of the Balkan Peninsula. European Journal of Forest Research 141, 641 - 648. https://doi.org/10.1007/s10342-022-01466-4
Krak K., Caklová P., Kopecký D., Blattner F. R. & Mahelka V. 2021: Horizontally Acquired nrDNAs Persist in Low Amounts in Host Hordeum Genomes and Evolve Independently of Native nrDNA. Frontiers in Plant Science 12, 1 - 13. doi:10.3389/fpls.2021.672879
Mahelka V., Krak K., Fehrer J., Caklová P., Nagy Nejedlá M., Čegan R., Kopecký D. & Šafář J. 2021: A Panicum-derived chromosomal segment captured by Hordeum a few million years ago preserves a set of stress-related genes. Plant Journal 105, 1141 - 1164. doi:10.1111/tpj.15167
Belyayev A., Jandová M., Josefiová J., Kalendar R., Mahelka V., Krak K. & Mandák B. 2020: The major satellite DNA families of the diploid Chenopodium album aggregate species: Arguments for and against the “library hypothesis”. PLoS One 15, 1 - 14. doi:10.1371/journal.pone.0241206
Belyayev A., Josefiová J., Jandová M., Mahelka V., Krak K. & Mandák B. 2020: Transposons and satellite DNA: on the origin of the major satellite DNA family in the Chenopodium genome. Mobile DNA 11, 1 - 10. doi:10.1186/s13100-020-00219-7
Herben T., Balšánková T., Hadincová V., Krahulec F., Pecháčková S., Skálová H. & Krak K. 2020: Fine-scale root community structure in the field: Species aggregations change with root density. Journal of Ecology 108, 1738 - 1749. doi:10.1111/1365-2745.13372
Krak K., Vít P., Douda J. & Mandák B. 2020: Development of 18 microsatellite markers for Salvia pratensis. Applications in Plant Sciences 8, 1 - 4. doi:10.1002/aps3.11316
Šmíd J., Douda J., Krak K. & Mandák B. 2020: Analyses of hybrid viability across a hybrid zone between two Alnus species using microsatellites and cpDNA markers. Genes 11, 1 - 18. doi:10.3390/genes11070770
Vít P., Krak K., Douda J. & Mandák B. 2020: Microsatellite markers for Anthericum ramosum: Development, characterisation, and cross-species amplification. Applications in Plant Sciences 8, 1 - 5. doi:10.1002/aps3.11323
Belyayev A., Josefiová J., Jandová M., Kalendar R., Krak K. & Mandák B. 2019: Natural History of a Satellite DNA Family: From the Ancestral Genome Component to Species-Specific Sequences, Concerted and Non-Concerted Evolution. International Journal of Molecular Sciences 20, 1 - 16. doi:10.3390/ijms20051201