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Komárek J. 2005: Studies on the cyanophytes (Cyanobacteria, Cyanoprkaryota) of Cuba 11. Freshwater Anabena species. Preslia 77, 211 - 234.
Komárek J. & Anagnostidis K. 2005: Cyanoprokaryota. 2 teil. Oscillatoriales. In:Büdel B., Krienitz L., Gärtner G. & Schagerl M. (eds) Süsswasserflora von Mitteleuropa, Band 19/2. Elsevier-Spektrum, Heidelberg, 1 - 759.
Komárek J., Komárková J., Ventura S. & Turicchia S. 2005: Comparison of phenotype and molecular diversity of cyanobacteria from alkaline marshes in Belize, Central America. Phycologia 44, 55 - 56.
Kvíderová, J. & Henley, W.J. 2005: The effect of ampicillin plus streptomycin on growth and photosynthesis of two halotolerant algae. Journal of Applied Phycology 17, 301 - 307.
Lukavský J. 2005: Mikroskopické organismy obývající vodu. In: kol.aut., Živel voda, Praha, 82 - 95.
Přibyl P., Cepák V. & Zachleder V. 2005: Alterations of cytoskeletonin the interphase cells of the green alga Spirogyra in response to heavy metals exposure: I. The effect of cadmium. Protoplasma 226, 231 - 240.
Rajaniemi P., Hrouzek P., Kaštovská K., Williame R., Rantala A., Hoffmann L., Komárek J. & Sivonen K. 2005: Phylogenic and morphological evaluation of the genera Anabena, Aphanizomenon, Trichormus and Nostoc (Nostocales, Cyanobacteria). 55, 11 - 26.
Stibal M. & Elster J. 2005: Growth and morphology variation as a response to changing environmental factors in two Arctic species of Raphidonema (Trebouxiophyceae) from snow and soil. Polar Biology 28, 558 - 567.
Šejnohová L., Komárek J., Zapomělová E., Pumann P., Maršálek B. & Babica P. 2005: Interactive key for identification water-bloom forming cyanobacteria. CD, Sdruzeni flos-aque, Brno, 1 - 343.
Šetlíková I., Balounová Z., Lukavský J. & Rajchard J. 2005: Nepůvodní druh mechovky na Třeboňsku. Živa 53, 172 - 174.
Švadlenková M., Lukavský J. & Kvíderová J. 2005: Radionuklides 137-Cs and 60-Co uptake by freshwater and marine microalgae Chlorella, Navicula, Phaeodactylum. In: Brechignac F., Desmet G. (eds.) Equidosimetry. Springer, Netherlands., 379 - 387.
Komárek J. & Hauer T. 2004-2014: CyanoDB.cz - On-line database of cyanobacterial genera. http://www.cyanodb.cz / PřF JU + BÚ.
Komárek J. & Hauer T. 2004-2010: CyanoDB.cz - On-line database of cyanobacterial genera. http://www.cyanodb.cz.
Branco L.H.Z., Komárek J., Azevedo M.T.P., Sant-Anna C.L. & Watanabe M. 2004: A review of the genus Cyanoarbor (Entophysalidaceae, Chroococcales). In: Hoffmann L. (ed.) 16th Symposium of the International Association for Cyanophyte Research, Abstracts, CRP Gabriel Lippmann, Luxembourg, 82 - 82.
Callagham T.V., Björn L.O., Chernov Y., Chapin T., Christensen T.R., Huntley B., Ims R.A., Johansson M., Jolly D., Jonasson S., Matveyeva N., Panikov N., Oechel W., Shaver G., Elster J., Hentonnen H., Laine K., Taulavuori K., Taulavuori E. & Zöckler C. 2004: Biodiversity, distributions and adaptations of Arctic species in the context of environmental change. 33(7), 404 - 417.
Callagham T.V., Björn L.O., Chernov Y., Chapin T., Christensen T.R., Huntley B., Ims R.A., Johansson M., Jolly D., Jonasson S., Matveyeva N., Panikov N., Oechel W., Shaver G., Elster J., Jónsdóttir I.S., Laine K., Taulavuori K., Taulavuori E. & Zöckler C. 2004: Responses to projected changes in climate and UV-B at the species level. 33(7), 418 - 435.
Cronberg G. & Komárek J. (2004): 2004: Some nostocalean cyanoprokaryotes from lentic habitats of Eastern and Southern Africa. Nova Hedwigia 78(1-2), 71 - 106.
Čtvrtlíková M. 2004: Soudobý výzkum šídlatek Isoëtes na Šumavě. NP Šumava, Aktuality šum. výzkumu II., 124 - 128.
Day J.G., Lukavský J., Lorenz, M. Friedl T., Elster J., Campbell, C.N. & Brand J.J. 2004: Pringsheim´s living legacy: CAUP, CCALA, CCAP, SAG and UTEX culture collections of algae. Nova Hedwigia 79, 27 - 37.
Elster J. & Benson E.E. 2004: Life in the polar terrestrial environment: a focus on algae. In : EE Benson, B Fuller and N Lane (editors) Life In The Frozen State. Taylor and Francis, London., 111 - 150.