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Hédl R. & Kopecký M. 2006: Hospodaření v lese a biodiverzita. Živa 54, 45 - 45.
Hédl R. & Lustyk P. 2006: Terénní manuál pro monitoring biotopů na trvalých plochách. Agentura ochrany přírody a krajiny České republiky, Praha, 1 - 41.
Hejcman M., Dvořák I.J., Kociánová M., Pavlů V., Nežerková P., Rauch O. & Jeník J. 2006: Snow depth and vegetation pattern in a late-melting snowbed analyzed by GPS and GIS in the Giant Mountains, Czech Republic. Arctic Antarctic and Alpine Research 38, 90 - 98.
Hejcman M., Pavlů V., Hejcmanová P., Gaisler J., Hakl J. & Rauch O. 2006: Farmer decision making and its effect on subalpine grassland succession in the Giant mts.,Czech republic. Acta Societatis Botanicorum Poloniae 75, 165 - 174.
Hejda M. & Pyšek P. 2006: What is the impact of Impatiens glandulifera on species diversity of invaded riparian vegetation? Biological Conservation 132, 143 - 152.
Herández L., Herrrera R. & Fiala K. 2006: Fine root biomass of various Cuban frests indicating the resistance to disturbance. Bugár G., Boltižiar M. (eds.) Abstract proceedings of the 14th International Symposium on Problems of Landscape Ecology Research, ILE SAS, Nitra, 2006, 70 - 70.
Herben T. Münzbergová Z., Mildén M., Ehrlén J., Cousins S.A.O. & Eriksson O. 2006: Long-term spatial dynamics of Succisa pratensis in a changing rural landscape: linking dynamical modelling with historical maps. Journal of Ecology 94, 131 - 143.
Holub P., Tůma I. & Záhora J. 2006: Nutrient accumulation and release in stands of several grasses expanding in contemporary landscape. Bugár G., Boltižiar M. (eds.) Abstract proceedings of the 14th International Symposium on Problems of Landscape Ecology Research, ILE SAS, Nitra, 71 - 71.
Honěk A., Jarošík V. & Dixon A.F.G. 2006: Comparing growth patterns among field populations of cereal aphids reveals factors limiting their maximum abundance. Bulletin of Entomological Research 96, 269 - 277.
Hubert J., Münzbergová Z., Kučerová Z. & Stejskal V. 2006: Comparison of communities of stored product mites in grain mass and grain residues in the Czech Republic. Experimental and Applid Acarology 39, 149 - 158.
Husák Š., Hájek T., Krčilová J. & Navrátilová J 2006: Macrophyte vegetation of the Elbe River and its significance for bioindication. Project Elbe IV: 2003–2006. T. G. Masaryk Water Research Institute, 73 - 83.
Chrtek J., Mráz P. & Sennikov A. N. 2006: Hieracium xgrofae - a rediscovered diploid hybrid from the Ukrainian Carpathians. Biologia 61, 365 - 373.
Iliev I., Petkov G., Furnandzhieva S., AndeevaR. & Lukavský J. 2006: Membrane metabolites of Arthronema africanum strains from extreme habitats. General and applied plant physiology 2006, 117 - 123.
Jančula D., Maršálek B. & Drábková M. 2006: Přípravky pro redukci masového rozvoje sinic. Maršálek B., Feldmannová M., Maršálková E. (ed.) Cyanobakterie 2006. Botanický ústav AV ČR, Průhonice, 156 - 160.
Jankovská V. 2006: Climatic and vegetation changes recorded pollenanalytically in the Holocene sediments in two palsa localities (Abisko:NW Sweden, Nikel:NW Russia-Kola Peninsula). In:Mikhina E.I., Muratova E.N. (eds.). Climate Changes and their Impact on Boreal and Temperate Forests. Abstracts of International Conference, June 5-7, 2006, Ekaterinburg, Russia, 39 - 40.
Jankovská V. 2006: Late Glacial and Holocene history of Plešné Lake and its surrounding landscape based on pollen and palaeoalgological analyses. Biologia 61, 371 - 385.
Jankovská V. 2006: Pollenanalyse ausgewählter Proben und Interpretation der Ergebnisse. In: Lička M. et Lutovský M. (eds.):Vepřek und Nová Ves (Bezirk Mělník, Mittelbőhmen). - Fontes archaeologici Pragensis, 31, Museum Nationale Pragae. ISBN:80-7036-209-x 31, 74 - 75.
Jankovská V. 2006: Pyloanalytický výzkum. In: Belcredi L. BYSTŘEC- O založení, životě a zániku středověké vsi. Brno, 2006., 398 - 404.
Jankovská V. 2006: Pyloanalytický záznam klimatických a vegetačních změn v palsách evropské boreální zóny. In: Ábelová M. et Ivanov M. (ed.): 12.Kvartér 2006. Sborn.abstraktů, Brno., 11 - 12.
Jankovská V. 2006: The Krkonoše Mts (Giant´s Mts) and palynological research:new results and interesting palaeobotanical finds. Sborn. abstraktů z konference \\, 13 - 13.